[gridengine users] Installation issues

LaoTsao laotsao at gmail.com
Mon Sep 5 18:07:56 UTC 2011


if you can rpm then just download the sge roll from rockscuster.org rock5.4.3
then extract the rpm, donot worry about the other rpm for rocks
r5.4.3 is for centos 5.6 hope that it will work for you

Sent from my iPad
Hung-Sheng Tsao ( LaoTsao) Ph.D

On Sep 5, 2011, at 13:01, Petter Gustad <gridengine at gustad.com> wrote:

> Dear gridengine users list,
> 
> This is the first time I try to install and use gridengine so I'm
> probably making lots of silly mistakes.
> 
> I'm trying to install gridengine on a Gentoo Linux X86_64 system. I
> have never used gridengine before so I have no ideas of installation
> structure, environment variables etc.
> 
> 
> Here's what I've done:
> tar xvfz SGE6.2u5p2.tar.gz
> 
> cd SGE6.2u5p2/source
> ./aimk -no-java -no-jni -no-secure -spool-classic -no-dump -only-depend
> ./scripts/zerodepend
> ./aimk -no-java -no-jni -no-secure -spool-classic -no-dump depend
> ./aimk -no-java -no-jni -no-secure -spool-classic -no-dump
> 
> The last step failed:
> 
> 
> 
> gcc -DSGE_ARCH_STRING=\"lx26-amd64\" -O3 -Wall -Werror -Wstrict-prototypes -DUSE_POLL -DLINUX -DLINUXAMD64 -DLINUXAMD64_26 -D_GNU_SOURCE -DGETHOSTBYNAME_R6 -DGETHOSTBYADDR_R8  -I/off_home/gridengine/db-4.4.20/lx26-amd64/include/ -DTARGET_64BIT  -DSPOOLING_classic  -Wno-strict-aliasing -DPLPA -DNO_JNI -DCOMPILE_DC -D__SGE_COMPILE_WITH_GETTEXT__  -D__SGE_NO_USERMAPPING__ -I../common -I../libs -I../libs/uti -I../libs/juti -I../libs/gdi -I../libs/japi -I../libs/sgeobj -I../libs/cull -I../libs/rmon -I../libs/comm -I../libs/comm/lists -I../libs/sched -I../libs/evc -I../libs/evm -I../libs/mir -I../libs/lck -I../daemons/common -I../daemons/qmaster -I../daemons/execd -I../daemons/schedd -I../clients/common -I. -I/work/pgu/SGE6.2u5p2/source/3rdparty/plpa/plpa-1.3.1/src/libplpa -fPIC -c ../libs/sgeobj/config.c
> cc1: warnings being treated as errors
> ../libs/sgeobj/config.c: In function 'set_conf_enum':
> ../libs/sgeobj/config.c:752: error: format not a string literal and no format arguments
> make: *** [config.o] Error 1
> not done
> 
> Then I tried to remove all -Werror:
> 
> diff aimk aimk.bu1 
> 1262c1262
> <    set CFLAGS   = "$OFLAG -woff 1035,3201,3496 -n32 -mips3 -mp -DFD_SETSIZE=8192 -DIRIX -D$BUILDARCH -DGETHOSTBYNAME_M -DGETHOSTBYADDR_M $DEBUG_FLAG -DUSE_SGE_UNSETENV $CFLAGS"
> ---
>>   set CFLAGS   = "$OFLAG -Werror -woff 1035,3201,3496 -n32 -mips3 -mp -DFD_SETSIZE=8192 -DIRIX -D$BUILDARCH -DGETHOSTBYNAME_M -DGETHOSTBYADDR_M $DEBUG_FLAG -DUSE_SGE_UNSETENV $CFLAGS"
> 1451c1451
> <    set CFLAGS = "$OFLAG -Wall -Wstrict-prototypes -DUSE_POLL -DLINUX -D$BUILDARCH -D$COMPILE_ARCH -D_GNU_SOURCE -DGETHOSTBYNAME_R6 -DGETHOSTBYADDR_R8 $DEBUG_FLAG $CFLAGS"
> ---
>>   set CFLAGS = "$OFLAG -Wall -Werror -Wstrict-prototypes -DUSE_POLL -DLINUX -D$BUILDARCH -D$COMPILE_ARCH -D_GNU_SOURCE -DGETHOSTBYNAME_R6 -DGETHOSTBYADDR_R8 $DEBUG_FLAG $CFLAGS"
> 1591c1591
> <       set CFLAGS = "-Wall -O0 -pipe $CFLAGS -rpath /usr/lib/x86"
> ---
>>      set CFLAGS = "-Wall -Werror -O0 -pipe $CFLAGS -rpath
>>      /usr/lib/x86"
> 
> 
> Then I try to run distinst
> 
> 
> mkdir -p $SGE_ROOT/vers
> ./scripts/distinst -allall -basedir /work/pgu/target-test-dir -vdir vers 
> ...
> Installing "3rd_party/" directory tree
> Installing "inst_sge", "install_qmaster" and "install_execd"
> Installing "util/" directory tree
> chmod: cannot access `/work/pgu/target-test-dir/vers/util/DetectJvmLibrary.jar': No such file or directory
> This command failed: chmod 644
> /work/pgu/target-test-dir/vers/util/install_modules/DB_CONFIG/work/pgu/target-test-dir/vers/util/install_modules/backup_template.conf
> /work/pgu/target-test-dir/vers/util/install_modules/inst_berkeley.sh
> /work...
> 
> 
> Installation failed. Exiting.
> 
> So what's the next step? Any hints or documentation pointers?
> 
> Thanks
> 
> //Petter
> 
> 
> 
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