[gridengine users] Command failed: ./utilbin/sol-amd64/spooldefaults configuration /tmp/configuration_2014-09-09_16:13:27.8242

Kraus, Niki Niki.Kraus at 3beg.at
Wed Sep 10 12:51:00 UTC 2014


ok good advice, thank you.

I copied the compiled files to a standalone server, same architecture of course, and tried to install it.

! dbelkf at dbegkgrt2:/Installer/OpenGridScheduler # /opt/csw/bin/gtar cf grid.tar GE2011.11p1
! dbelkf at dbegkgrt2:/Installer/OpenGridScheduler # scp grid.tar voyager:/data/foo

! dbelkf at voyager:/data/foo # /opt/csw/bin/gtar xf grid.tar
! dbelkf at voyager:/data/foo/GE2011.11p1/source # SGE_ROOT=/reuters/sge ; export SGE_ROOT
! dbelkf at voyager:/data/foo/GE2011.11p1/source # scripts/distinst -all -local -noexit

No architecture specified. Assuming architecture is sol-amd64

    Installing: sge_qmaster sge_execd sge_shadowd sge_shepherd sge_coshepherd qstat qsub qalter qconf qdel qacct qmod qsh utilbin jobs qmon qhost qmake qtcsh qping qloadsensor.exe sgepasswd qquota qrsub qrstat qrdel common
 Architectures: sol-amd64
Base directory: /reuters/sge
   OK [Y/N][Y]:

Installing "3rd_party/" directory tree
Installing "inst_sge", "install_qmaster" and "install_execd"
Installing "util/" directory tree
chmod: WARNING: can't access /reuters/sge/util/DetectJvmLibrary.jar

This command failed: chmod 644 /reuters/sge/util/install_modules/DB_CONFIG /reuters/sge/util/install_modules/backup_template.conf /reuters/sge/util/install_modules/inst_berkeley.sh /reuters/sge/util/install_modules/inst_common.sh /reuters/sge/util/install_modules/inst_execd.sh /reuters/sge/util/install_modules/inst_execd_uninst.sh /reuters/sge/util/install_modules/inst_qmaster.sh /reuters/sge/util/install_modules/inst_qmaster_uninst.sh /reuters/sge/util/install_modules/inst_schedd_high.conf /reuters/sge/util/install_modules/inst_schedd_max.conf /reuters/sge/util/install_modules/inst_schedd_normal.conf /reuters/sge/util/install_modules/inst_st.sh /reuters/sge/util/install_modules/inst_template.conf /reuters/sge/util/rctemplates/darwin_template /reuters/sge/util/rctemplates/sgebdb_template /reuters/sge/util/rctemplates/sgeexecd_template /reuters/sge/util/rctemplates/sgemaster_template /reuters/sge/util/sgeCA/sge_ca.cnf /reuters/sge/util/sgeCA/sge_ssl.cnf /reuters/sge/util/sgeCA/sge_ssl_template.cnf /reuters/sge/util/sgeSMF/bdb_template.xml /reuters/sge/util/sgeSMF/execd_template.xml /reuters/sge/util/sgeSMF/qmaster_template.xml /reuters/sge/util/sgeSMF/shadowd_template.xml /reuters/sge/util/sgeSMF/sge_smf_support.sh /reuters/sge/util/DetectJvmLibrary.jar /reuters/sge/util/resources/calendars/day /reuters/sge/util/resources/calendars/day_s /reuters/sge/util/resources/calendars/night /reuters/sge/util/resources/calendars/night_s /reuters/sge/util/resources/centry/arch /reuters/sge/util/resources/centry/calendar /reuters/sge/util/resources/centry/cpu /reuters/sge/util/resources/centry/display_win_gui /reuters/sge/util/resources/centry/h_core /reuters/sge/util/resources/centry/h_cpu /reuters/sge/util/resources/centry/h_data /reuters/sge/util/resources/centry/h_fsize /reuters/sge/util/resources/centry/h_rss /reuters/sge/util/resources/centry/h_rt /reuters/sge/util/resources/centry/h_stack /reuters/sge/util/resources/centry/h_vmem /reuters/sge/util/resources/centry/hostname /reuters/sge/util/resources/centry/load_avg /reuters/sge/util/resources/centry/load_long /reuters/sge/util/resources/centry/load_medium /reuters/sge/util/resources/centry/load_short /reuters/sge/util/resources/centry/m_core /reuters/sge/util/resources/centry/m_socket /reuters/sge/util/resources/centry/m_topology /reuters/sge/util/resources/centry/m_topology_inuse /reuters/sge/util/resources/centry/mem_free /reuters/sge/util/resources/centry/mem_total /reuters/sge/util/resources/centry/mem_used /reuters/sge/util/resources/centry/min_cpu_interval /reuters/sge/util/resources/centry/np_load_avg /reuters/sge/util/resources/centry/np_load_long /reuters/sge/util/resources/centry/np_load_medium /reuters/sge/util/resources/centry/np_load_short /reuters/sge/util/resources/centry/num_proc /reuters/sge/util/resources/centry/qname /reuters/sge/util/resources/centry/rerun /reuters/sge/util/resources/centry/s_core /reuters/sge/util/resources/centry/s_cpu /reuters/sge/util/resources/centry/s_data /reuters/sge/util/resources/centry/s_fsize /reuters/sge/util/resources/centry/s_rss /reuters/sge/util/resources/centry/s_rt /reuters/sge/util/resources/centry/s_stack /reuters/sge/util/resources/centry/s_vmem /reuters/sge/util/resources/centry/seq_no /reuters/sge/util/resources/centry/slots /reuters/sge/util/resources/centry/swap_free /reuters/sge/util/resources/centry/swap_rate /reuters/sge/util/resources/centry/swap_rsvd /reuters/sge/util/resources/centry/swap_total /reuters/sge/util/resources/centry/swap_used /reuters/sge/util/resources/centry/tmpdir /reuters/sge/util/resources/centry/virtual_free /reuters/sge/util/resources/centry/virtual_total /reuters/sge/util/resources/centry/virtual_used /reuters/sge/util/resources/pe/make /reuters/sge/util/resources/pe/make.sge_pqs_api /reuters/sge/util/resources/schemas/qhost/qhost.xsd /reuters/sge/util/resources/schemas/qquota/qquota.xsd /reuters/sge/util/resources/schemas/qrstat/qrstat.xsd /reuters/sge/util/resources/schemas/qstat/detailed_job_info.xsd /reuters/sge/util/resources/schemas/qstat/detailed_job_info_cb.xsd /reuters/sge/util/resources/schemas/qstat/message.xsd /reuters/sge/util/resources/schemas/qstat/qstat.xsd /reuters/sge/util/resources/schemas/qstat/qstat_cb.xsd /reuters/sge/util/resources/usersets/arusers /reuters/sge/util/resources/usersets/deadlineusers /reuters/sge/util/resources/usersets/defaultdepartment

Installing "examples/jobs"
Copying Pixmaps and Qmon resource file
changing to /reuters/sge/qmon/PIXMAPS
ln -s intro-sge.xpm intro.xpm
ln: cannot create intro.xpm: File exists
ln -s logo-sge.xpm logo.xpm
ln: cannot create logo.xpm: File exists
Installing "pvm"
Installing DRMAA include files
Installing "Dtrace scripts"
Installing "mpi/"
Installing "hadoop/"
Installing "ckpt/"
common part done

Installing "start_gui_installer" and "/util/gui-installer"
cp: cannot access /data/foo/GE2011.11p1/source/clients/gui-installer/dist/installer.jar

This command failed: cp /data/foo/GE2011.11p1/source/clients/gui-installer/dist/installer.jar /reuters/sge/util/gui-installer

GUI installer part done

Checking and creating binary directories
Installing binaries for sol-amd64 from /data/foo/GE2011.11p1/source/SOLARISAMD64 -->
                          --> /reuters/sge/bin/sol-amd64
------------------------------------------------------------------------
Installing sge_qmaster
Installing sge_execd
Installing sge_shadowd
Installing sge_shepherd
Installing sge_coshepherd
Installing qstat
changing to /reuters/sge/bin/sol-amd64
ln -s qstat qselect
Installing qsub
Installing qalter
changing to /reuters/sge/bin/sol-amd64
ln -s qalter qresub
ln -s qalter qhold
ln -s qalter qrls
Installing qconf
Installing qdel
Installing qacct
Installing qmod
Installing qsh
changing to /reuters/sge/bin/sol-amd64
ln -s qsh qlogin
ln -s qsh qrsh
Installing qmon
Installing qhost
Installing qmake
Installing qtcsh
Installing qping
Installing sgepasswd
Installing qquota
Installing qrsub
Installing qrstat
Installing qrdel
Installing utility binaries
---------------------------
Installing uidgid
Installing gethostname
Installing gethostbyname
Installing gethostbyaddr
Installing getservbyname
Installing filestat
Installing checkprog
Installing loadcheck
Installing now
Installing checkuser
Installing adminrun
Installing qrsh_starter
Installing testsuidroot
Installing authuser
Installing read_raw
Installing echo_raw
Installing sge_share_mon
Installing infotext
Installing spooldefaults
Installing spooledit
Installing spoolinit
Installing fstype
Installing valid_jvmlib
"openssl" binary not found
Installing ../3rdparty/remote/SOLARISAMD64/rsh
Installing ../3rdparty/remote/SOLARISAMD64/rshd
Installing ../3rdparty/remote/SOLARISAMD64/rlogin
Installing job binaries
-----------------------
Installing work
Installing showq
Installing shared libraries
---------------------------
Installing libjuti.so
Installing ../3rdparty/qmon/SOLARISAMD64/libXltree.so
"libdb-4.4.so" not found. Assuming binaries are statically linked.
Installing libdrmaa.so.1.0
! dbelkf at voyager:/data/foo/GE2011.11p1/source #

! dbelkf at voyager:/reuters/sge # ./install_qmaster
...

-> same result :-/

Could the cause be in the compilation process, which looked fine, as a scanned it ?

-- Nick



-----Ursprüngliche Nachricht-----
Von: users-bounces at gridengine.org [mailto:users-bounces at gridengine.org] Im Auftrag von William Hay
Gesendet: Mittwoch, 10. September 2014 12:57
An: users at gridengine.org
Betreff: Re: [gridengine users] Command failed: ./utilbin/sol-amd64/spooldefaults configuration /tmp/configuration_2014-09-09_16:13:27.8242

On Wed, 10 Sep 2014 10:12:53 +0000
"Kraus, Niki" <Niki.Kraus at 3beg.at> wrote:

 
> 
> This is a non-global zone, and /reuters/sge is shared via NFS, but that shouldn't make any difference or does it?
> 
> In my opinion it's not a permission problem, all files are owned by sgeadmin, and the install script is run as root, and furthermore sgeadmin may create files in this namespace.
> 
Depends.  Is it local to the machine on which you are running the script or mounted from another server?  If it is mounted from another server then things run as root may be being squashed to nobody and therefore unable to write to non-world writable files/directories.

--
William Hay <w.hay at ucl.ac.uk>




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